Ariana_samples — featureCounts (PE+SE, s0)
A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
/lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/logs/featurecounts/lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/counts/counts_pe.txt.summary/lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/counts/counts_se_s0.txt.summary/lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/counts/counts_se.txt.summary
General Statistics
| Sample Name | Assigned | Assigned |
|---|---|---|
| SRR14864064 | 25.8M | 22.9% |
| SRR14864065 | 20.8M | 20.3% |
| SRR14864066 | 16.5M | 16.1% |
| SRR14864067 | 40.1M | 44.6% |
| SRR14864068 | 33.5M | 44.1% |
| SRR14864069 | 39.1M | 49.2% |
| SRR14864070 | 39.6M | 49.4% |
| SRR14864071 | 40.9M | 43.5% |
| SRR14864072 | 35.2M | 44.7% |
| SRR22293445 | 0.7M | 13.4% |
| SRR22293446 | 0.8M | 13.3% |
| SRR22293447 | 0.9M | 12.8% |
| SRR22293448 | 0.9M | 14.7% |
| SRR22293449 | 0.8M | 12.5% |
| SRR22293450 | 0.9M | 13.1% |
| SRR22293451 | 1.0M | 14.4% |
| SRR22293452 | 0.7M | 12.0% |
| SRR22293453 | 0.9M | 10.8% |
| SRR22293454 | 0.6M | 12.1% |
| SRR22293455 | 0.7M | 11.3% |
| SRR22293456 | 0.7M | 12.1% |
| SRR22293457 | 0.7M | 12.0% |
| SRR22293458 | 0.4M | 5.5% |
| SRR22293459 | 0.5M | 7.8% |
| SRR22293460 | 0.4M | 5.5% |
| SRR22293461 | 0.9M | 9.5% |
| SRR22293462 | 0.9M | 9.0% |
| SRR22293463 | 0.8M | 8.1% |
| SRR22293464 | 0.9M | 14.5% |
| SRR22293465 | 0.7M | 9.6% |
| SRR22293466 | 0.8M | 16.2% |
| SRR22293467 | 0.6M | 12.5% |
| SRR22293468 | 0.8M | 14.1% |
| SRR22293469 | 0.7M | 17.0% |
| SRR22293470 | 0.9M | 16.2% |
| SRR22293471 | 0.5M | 6.0% |
| SRR22293472 | 0.9M | 15.7% |
| SRR22293473 | 0.5M | 6.8% |
| SRR22293474 | 0.7M | 14.8% |
| SRR22293475 | 1.0M | 13.0% |
| SRR22293476 | 0.8M | 12.1% |
| SRR22293477 | 0.9M | 12.7% |
| SRR22293478 | 0.7M | 14.1% |
| SRR22293479 | 1.0M | 13.6% |
| SRR22293480 | 0.7M | 8.6% |
| SRR22293481 | 0.7M | 14.1% |
| SRR22293482 | 0.5M | 5.9% |
| SRR22293483 | 0.6M | 7.5% |
featureCounts
Counts mapped reads for genomic features such as genes, exons, promoter, gene bodies, genomic bins and chromosomal locations.URL: http://subread.sourceforge.netDOI: 10.1093/bioinformatics/btt656