Ariana_samples — featureCounts (PE+SE, s0)

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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411
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        This report was generated using MultiQC, version 1.29

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        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        Ariana_samples — featureCounts (PE+SE, s0)

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2025-08-11, 09:23 IDT based on data in:
        • /lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/logs/featurecounts
        • /lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/counts/counts_pe.txt.summary
        • /lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/counts/counts_se_s0.txt.summary
        • /lustre1/home/mass/amalia/montipora_mapping/Ariana_samples/counts/counts_se.txt.summary

        General Statistics

        Showing 48/48 rows and 1/2 columns.
        Sample NameAssignedAssigned
        SRR14864064
        25.8M
        22.9%
        SRR14864065
        20.8M
        20.3%
        SRR14864066
        16.5M
        16.1%
        SRR14864067
        40.1M
        44.6%
        SRR14864068
        33.5M
        44.1%
        SRR14864069
        39.1M
        49.2%
        SRR14864070
        39.6M
        49.4%
        SRR14864071
        40.9M
        43.5%
        SRR14864072
        35.2M
        44.7%
        SRR22293445
        0.7M
        13.4%
        SRR22293446
        0.8M
        13.3%
        SRR22293447
        0.9M
        12.8%
        SRR22293448
        0.9M
        14.7%
        SRR22293449
        0.8M
        12.5%
        SRR22293450
        0.9M
        13.1%
        SRR22293451
        1.0M
        14.4%
        SRR22293452
        0.7M
        12.0%
        SRR22293453
        0.9M
        10.8%
        SRR22293454
        0.6M
        12.1%
        SRR22293455
        0.7M
        11.3%
        SRR22293456
        0.7M
        12.1%
        SRR22293457
        0.7M
        12.0%
        SRR22293458
        0.4M
        5.5%
        SRR22293459
        0.5M
        7.8%
        SRR22293460
        0.4M
        5.5%
        SRR22293461
        0.9M
        9.5%
        SRR22293462
        0.9M
        9.0%
        SRR22293463
        0.8M
        8.1%
        SRR22293464
        0.9M
        14.5%
        SRR22293465
        0.7M
        9.6%
        SRR22293466
        0.8M
        16.2%
        SRR22293467
        0.6M
        12.5%
        SRR22293468
        0.8M
        14.1%
        SRR22293469
        0.7M
        17.0%
        SRR22293470
        0.9M
        16.2%
        SRR22293471
        0.5M
        6.0%
        SRR22293472
        0.9M
        15.7%
        SRR22293473
        0.5M
        6.8%
        SRR22293474
        0.7M
        14.8%
        SRR22293475
        1.0M
        13.0%
        SRR22293476
        0.8M
        12.1%
        SRR22293477
        0.9M
        12.7%
        SRR22293478
        0.7M
        14.1%
        SRR22293479
        1.0M
        13.6%
        SRR22293480
        0.7M
        8.6%
        SRR22293481
        0.7M
        14.1%
        SRR22293482
        0.5M
        5.9%
        SRR22293483
        0.6M
        7.5%

        featureCounts

        Counts mapped reads for genomic features such as genes, exons, promoter, gene bodies, genomic bins and chromosomal locations.URL: http://subread.sourceforge.netDOI: 10.1093/bioinformatics/btt656

        Assignments

        Created with MultiQC

        MultiQC v1.29 - Written by Phil Ewels, available on GitHub.

        This report uses Plotly, jQuery, jQuery UI, Bootstrap and FileSaver.js.